Installation

We strongly recommend using conda for installation. Note that lahuta requires Python 3.10 or higher to work. We recommend python 3.11.

conda create -n lahuta python=3.11
conda activate lahuta

conda install -c conda-forge -c bioconda -c bisejdiu lahuta

Alternatively, you can install lahuta from source:

git clone 
cd lahuta
pip install .

Note that for the installation from source to work, you need to have the following dependencies installed:

conda install -c conda-forge openbabel MDAnalysis gemmi typer
conda install -c bioconda mafft muscle # for aligning sequences