Plotting Contacts
Visualizing computed contacts is also easy and straighforward, as the following example shows:
Example - Contact Map
from lahuta import Luni
luni = Luni("path/to/file.pdb")
ns = luni.compute_neighbors()
ns.plot() # (1)!
ns.plot('full', half_only=True) # (2)!
- Plots a contact map for only the indices that are in the
pairs
array - Plots a contact map for all atoms in the loaded system
TODO:¶
Add example images